ChromasPro 1.7.7 + Portable

ChromasPro is suitable for sequencing projects up to a few megabases, and basic sequence editing and analysis. It is able to assemble data from 454 and Illumina next-generation sequencers, with up to 100,000 sequences if 2 Gb RAM is available.

ChromasPro has the following features:
• Open and save sequences in Applied Biosystems, Staden Chromatogram (SCF), MegaBace (.esd), 454 SFF, FASTA, FASTQ, EMBL, GenBank, SwissProt, GenPept, GCG RSF and plain text formats.
• Assemble overlapping sequences into a consensus and automatically display ambiguities for editing.
• Use quality data to automatically remove low quality sequence and improve sequence assembly.
• View Genescan genotype files.
• Generate restriction site and fragment maps, and list cutters, non-cutters and fragments.
• Map open reading frames, aided by a G+C frame plot, and translate ORFs with one click.
• Print chromatograms, restriction site and fragment maps, and open reading frame maps.
• Perform nucleotide and protein BLAST searches through the NCBI web site.
• Perform multiple alignments by interfacing with ClustalW.
• Reverse & complement sequences and chromatograms.
• Search for sequences by exact matching or optimal alignment.
• Display translations when editing nucleotide sequences.
• Perform reverse translations and plot nucleotide degeneracy.
• Plot hydrophilicity and antigenicity of proteins.
• Copy an image of a chromatogram section for pasting into documents or presentations.

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